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2.0

Changes from 1.2 -> 2.0

Added

  • coverage.datasetCompleteness (optional): The URL where a Researcher can learn more about the completeness of the dataset.
  • coverage.followUp (optional): If known, what is the typical time span that a patient appears in the dataset (follow up period)
  • demographicFrequency (optional): An object containing demographic frequency data categorised by age, ethnicity, and disease attributes.
  • demographicFrequency.age (optional): Array of age bins and their corresponding counts.
  • demographicFrequency.age.bin: Age bin
  • demographicFrequency.age.count: Age count
  • demographicFrequency.disease (optional): Array of diseases and their corresponding counts.
  • demographicFrequency.disease.count: Disease count
  • demographicFrequency.disease.diseaseCode: Disease code
  • demographicFrequency.disease.diseaseCodeVocabulary: Disease code vocabulary
  • demographicFrequency.ethnicity (optional): Array of ethnicity bins and their corresponding counts.
  • demographicFrequency.ethnicity.bin: Ethnicity bin
  • demographicFrequency.ethnicity.count: Ethnicity count
  • linkage.datasetLinkage.isDerivedFrom.pid (optional): Persistent identifier of a dataset
  • linkage.datasetLinkage.isDerivedFrom.title (optional): Title of a dataset
  • linkage.datasetLinkage.isDerivedFrom.url (optional): Url of a dataset
  • linkage.datasetLinkage.isMemberOf.pid (optional): Persistent identifier of a dataset
  • linkage.datasetLinkage.isMemberOf.title (optional): Title of a dataset
  • linkage.datasetLinkage.isMemberOf.url (optional): Url of a dataset
  • linkage.datasetLinkage.isPartOf.pid (optional): Persistent identifier of a dataset
  • linkage.datasetLinkage.isPartOf.title (optional): Title of a dataset
  • linkage.datasetLinkage.isPartOf.url (optional): Url of a dataset
  • linkage.datasetLinkage.linkedDatasets.pid (optional): Persistent identifier of a dataset
  • linkage.datasetLinkage.linkedDatasets.title (optional): Title of a dataset
  • linkage.datasetLinkage.linkedDatasets.url (optional): Url of a dataset
  • linkage.publicationAboutDataset (optional): DOIs for publications which describe the dataset.
  • linkage.publicationUsingDataset (optional): DOIs for publications which use the dataset for analysis.
  • omics (optional): Omics
  • omics.assay (optional): The specific 'omics assay that generated the dataset.
  • omics.platform (optional): The specific technology or infrastructure used to perform the assay. If the omics platform used to create your dataset is not listed, please select other, a member of the gateway team will contact you to add an appropriate term(s) both to your record and to the metadata schema on your behalf.
  • provenance.origin.imageContrast (optional): Indicate whether usage of imaging contrast is captured within the dataset.
  • summary.inPipeline (optional): Indicate whether this dataset is currently available for Researchers to request access.

Removed

  • coverage.anthropometric
  • coverage.biologicalsamples
  • coverage.followup
  • coverage.gender
  • coverage.lifestyle
  • coverage.physical
  • coverage.psychological
  • coverage.socioeconomic

Modified

  • accessibility: became required
  • accessibility.access.accessRights: became optional
  • accessibility.access.dataController: became optional
  • accessibility.access.deliveryLeadTime: type DeliveryLeadTime['LESS 1 WEEK','1-2 WEEKS','2-4 WEEKS','1-2 MONTHS','2-6 MONTHS','MORE 6 MONTHS','VARIABLE','NOT APPLICABLE','OTHER',null]|null → DeliveryLeadTimeV2['Less than 1 week','1-2 weeks','2-4 weeks','1-2 months','2-6 months','More than 6 months','Variable','Not applicable','Other']|null
  • accessibility.access.jurisdiction: became optional
  • accessibility.formatAndStandards.conformsTo: became optional
  • accessibility.formatAndStandards.formats: became optional
  • accessibility.formatAndStandards.languages: became optional
  • accessibility.formatAndStandards.vocabularyEncodingSchemes: became optional
  • accessibility.usage.dataUseLimitation: became optional
  • accessibility.usage.dataUseRequirement: became optional
  • accessibility.usage.resourceCreator.name: became optional
  • linkage.datasetLinkage.isDerivedFrom: type CommaSeparatedValues[{'anyOf': [{'pattern': '([^,]+)', 'type': 'string'}, {'type': 'null'}]}]|null → DatasetDescriptor; is now a list
  • linkage.datasetLinkage.isMemberOf: type CommaSeparatedValues[{'anyOf': [{'pattern': '([^,]+)', 'type': 'string'}, {'type': 'null'}]}]|null → DatasetDescriptor; is now a list
  • linkage.datasetLinkage.isPartOf: type CommaSeparatedValues[{'anyOf': [{'pattern': '([^,]+)', 'type': 'string'}, {'type': 'null'}]}]|null → DatasetDescriptor; is now a list
  • linkage.datasetLinkage.linkedDatasets: type CommaSeparatedValues[{'anyOf': [{'pattern': '([^,]+)', 'type': 'string'}, {'type': 'null'}]}]|null → DatasetDescriptor; is now a list
  • observations.observedNode: type StatisticalPopulationConstrained['PERSONS','EVENTS','FINDINGS'] → StatisticalPopulationConstrainedV2['Persons','Events','Findings','Number of scans per modality']
  • provenance.temporal.accrualPeriodicity: type Periodicity['STATIC','IRREGULAR','CONTINUOUS','BIENNIAL','ANNUAL','BIANNUAL','QUARTERLY','BIMONTHLY','MONTHLY','BIWEEKLY','WEEKLY','SEMIWEEKLY','DAILY','OTHER',null] → PeriodicityV2['Static','Irregular','Continuous','Biennial','Annual','Biannual','Quarterly','Bimonthly','Monthly','Biweekly','Weekly','Twice a week','Daily','Other',null]
  • provenance.temporal.startDate: became optional
  • provenance.temporal.timeLag: type TimeLag['LESS 1 WEEK','1-2 WEEKS','2-4 WEEKS','1-2 MONTHS','2-6 MONTHS','MORE 6 MONTHS','VARIABLE','NO TIMELAG','NOT APPLICABLE','OTHER',null] → TimeLagV2['Less than 1 week','1-2 weeks','2-4 weeks','1-2 months','2-6 months','More than 6 months','Variable','Not applicable','Other']
  • required.revisions.url: type Url[{'anyOf': [{'format': 'uri', 'minLength': 1, 'type': 'string'}, {'type': 'null'}]}] → Url[{'anyOf': [{'format': 'uri', 'minLength': 1, 'type': 'string'}, {'type': 'null'}]}]|null
  • structuralMetadata.name: became optional
  • summary.contactPoint: became optional
  • summary.controlledKeywords: became optional
  • summary.datasetSubType: type DatasetType[{'anyOf': [{'maxLength': 100, 'minLength': 2, 'type': 'string'}, {'type': 'null'}]}]|null → CommaSeparatedValues[{'anyOf': [{'pattern': '([^,]+)', 'type': 'string'}, {'type': 'null'}]}]|null
  • summary.datasetType: type DatasetType[{'anyOf': [{'maxLength': 100, 'minLength': 2, 'type': 'string'}, {'type': 'null'}]}]|null → CommaSeparatedValues[{'anyOf': [{'pattern': '([^,]+)', 'type': 'string'}, {'type': 'null'}]}]|null; became optional
  • summary.description: became optional
  • summary.doiName: became optional
  • summary.keywords: became optional
  • summary.publisher: became optional
  • summary.publisher.name: became optional
  • summary.shortTitle: became optional