Welcome to our repo for
python tools used by/with the CaRROT project. The primary functionality is used for performing ETL on health datasets, converting them to the OHDSI Common Data Model (CDM), via a command line interface.
The primary purpose of the CaRROT-CDM package is to Extract input datasets and Transform them using mapping rules defined in a json file, outputting formatted datasets in
tsv format that can be Loaded into a database or other destination (ETL).
To get started with the ETL process, follow the instructions for installing the CaRROT-CDM package and running the ETL on the following pages:
More detailed guides and documentation for users and developers can be found in the following locations: